FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032723 through 18771 annotations produced 1 hits

CG18397 (ssp3):

Annotation Number : CG18397
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032723
Gbrowse : chr2L:18916524-18943948 (-) // 100.0 //
Probeset : 1624117_at
Accessions : protein= NP_609917;, nucleotide= NM_136073;
Pathway : 0005819 // spindle // inferred from direct assay
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from phy
FlyMine data for FBgn0032723.
BioGrid reports that CG18397 interacts with CG4511 CG2213 .
VDRC has 1 RNAi stocks for FBgn0032723 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	143 ± 3	4 of 4	1.60	Up
Head	53 ± 4	4 of 4	0.60	Down
Eye	43 ± 6	4 of 4	0.49	Down
Thoracicoabdominal ganglion	122 ± 5	4 of 4	1.40	Up
Salivary gland	66 ± 4	4 of 4	0.75	Down
Crop	45 ± 2	4 of 4	0.50	Down
Midgut	37 ± 1	4 of 4	0.40	Down
Tubule	30 ± 2	4 of 4	0.30	Down
Hindgut	42 ± 2	4 of 4	0.50	Down
Heart	33 ± 1	4 of 4	0.38	Down
Fat body	73 ± 7	4 of 4	0.83	Down
Ovary	171 ± 4	4 of 4	1.90	Up
Testis	352 ± 29	4 of 4	4.00	Up
Male accessory glands	40 ± 4	4 of 4	0.50	Down
Virgin spermatheca	45 ± 2	4 of 4	0.52	Down
Mated spermatheca	50 ± 3	4 of 4	0.57	Down
Adult carcass	42 ± 2	4 of 4	0.50	Down
Larval CNS	180 ± 10	4 of 4	2.05	Up
Larval Salivary gland	62 ± 5	4 of 4	0.71	Down
Larval midgut	59 ± 3	4 of 4	0.67	Down
Larval tubule	54 ± 3	4 of 4	0.60	Down
Larval hindgut	69 ± 5	4 of 4	0.79	Down
Larval fat body	98 ± 24	4 of 4	1.10	None
Larval trachea	59 ± 4	4 of 4	0.68	Down
Larval carcass	71 ± 3	4 of 4	0.81	Down
S2 cells (growing)	59 ± 3	4 of 4	0.68	Down
Whole fly	88 ± 4	4 of 4

Looking for FBgn0032723. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720