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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032732 through 18771 annotations produced 1 hits



(CG15168):

Annotation Number : CG15168
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032732
Gbrowse : chr2L:18987726-18988290 (+) // 100.0 //
Probeset : 1627027_at
Accessions : protein= NP_609926;, nucleotide= NM_136082;
FlyMine data for FBgn0032732.
BDGP gene expression has embryonic in situ data for CG15168: 6 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0032732 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain240 ± 54 of 4 1.00None
Head242 ± 24 of 4 1.00None
Eye514 ± 244 of 4 2.12Up
Thoracicoabdominal ganglion293 ± 154 of 4 1.20Up
Salivary gland272 ± 274 of 4 1.12None
Crop238 ± 44 of 4 1.00None
Midgut259 ± 114 of 4 1.10None
Tubule115 ± 34 of 4 0.50Down
Hindgut268 ± 204 of 4 1.10None
Heart375 ± 154 of 4 1.55Up
Fat body302 ± 164 of 4 1.24Up
Ovary397 ± 24 of 4 1.60Up
Testis310 ± 84 of 4 1.30Up
Male accessory glands261 ± 64 of 4 1.10None
Virgin spermatheca131 ± 74 of 4 0.54Down
Mated spermatheca154 ± 214 of 4 0.63Down
Adult carcass266 ± 54 of 4 1.10None
Larval CNS254 ± 134 of 4 1.05None
Larval Salivary gland248 ± 104 of 4 1.03None
Larval midgut211 ± 124 of 4 0.87None
Larval tubule161 ± 74 of 4 0.70Down
Larval hindgut206 ± 44 of 4 0.85Down
Larval fat body161 ± 84 of 4 0.70Down
Larval trachea260 ± 204 of 4 1.07None
Larval carcass191 ± 104 of 4 0.79Down
S2 cells (growing)353 ± 104 of 4 1.46Up
Whole fly242 ± 114 of 4

Looking for FBgn0032732. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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