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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032734 through 18771 annotations produced 1 hits



(CG15169):

Annotation Number : CG15169
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032734
Gbrowse : chr2L:18991074-18992112 (+) // 100.0 //
Probeset : 1623841_at
Accessions : protein= NP_609928;, nucleotide= NM_136084;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032734.
BioGrid reports that CG15169 interacts with CG2677 .
VDRC has 2 RNAi stocks for FBgn0032734 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10Down
Head41 64 of 4 5.30Up
Eye5 10 of 4 0.67None
Thoracicoabdominal ganglion4 10 of 4 0.50None
Salivary gland14 40 of 4 1.84None
Crop7 00 of 4 0.90None
Midgut24 40 of 4 3.10Up
Tubule4 00 of 4 0.60Down
Hindgut7 00 of 4 1.00None
Heart5 12 of 4 0.75None
Fat body7 20 of 4 1.00None
Ovary2 00 of 4 0.30None
Testis1 00 of 4 0.20None
Male accessory glands3 20 of 4 0.50None
Virgin spermatheca2 00 of 4 0.28None
Mated spermatheca3 00 of 4 0.45None
Adult carcass11 30 of 4 1.40None
Larval CNS3 10 of 4 0.44None
Larval Salivary gland4 20 of 4 0.57None
Larval midgut31 34 of 4 4.02Up
Larval tubule7 21 of 4 0.90None
Larval hindgut5 00 of 4 0.64None
Larval fat body5 20 of 4 0.70None
Larval trachea1 00 of 4 0.19None
Larval carcass7 10 of 4 0.97None
S2 cells (growing)4 10 of 4 0.54None
Whole fly7 21 of 4

Looking for FBgn0032734. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime