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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032746 through 18771 annotations produced 1 hits



transcription unit 37B2 (CG10470):

Annotation Number : CG10470
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032746
Gbrowse : chr2L:19049078-19049886 (+) // 100.0 //
Probeset : 1634862_at
Accessions : protein= NP_609936;, nucleotide= NM_136092;
FlyMine data for FBgn0032746.
BioGrid reports that CG10470 interacts with CG9339 CG6667 CG9511 .
VDRC has 2 RNAi stocks for FBgn0032746 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain239 ± 34 of 4 0.70Down
Head351 ± 154 of 4 1.00None
Eye320 ± 44 of 4 0.89None
Thoracicoabdominal ganglion308 ± 124 of 4 0.90Down
Salivary gland453 ± 114 of 4 1.26Up
Crop364 ± 174 of 4 1.00None
Midgut579 ± 114 of 4 1.60Up
Tubule385 ± 204 of 4 1.10None
Hindgut392 ± 94 of 4 1.10None
Heart621 ± 244 of 4 1.73Up
Fat body870 ± 1154 of 4 2.42Up
Ovary489 ± 94 of 4 1.40Up
Testis502 ± 124 of 4 1.40Up
Male accessory glands656 ± 134 of 4 1.80Up
Virgin spermatheca479 ± 174 of 4 1.33Up
Mated spermatheca586 ± 274 of 4 1.63Up
Adult carcass512 ± 434 of 4 1.40Up
Larval CNS376 ± 194 of 4 1.04None
Larval Salivary gland656 ± 154 of 4 1.82Up
Larval midgut426 ± 334 of 4 1.18None
Larval tubule343 ± 74 of 4 1.00None
Larval hindgut516 ± 154 of 4 1.43Up
Larval fat body377 ± 64 of 4 1.00None
Larval trachea325 ± 284 of 4 0.90None
Larval carcass507 ± 394 of 4 1.41Up
S2 cells (growing)441 ± 34 of 4 1.23Up
Whole fly360 ± 154 of 4

Looking for FBgn0032746. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime