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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032749 through 18771 annotations produced 1 hits



CG10493 (Phlpp):

Annotation Number : CG10493
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032749
Gbrowse : chr2L:19059646-19063049 (+) // 100.0 //
Probeset : 1623550_at
Accessions : protein= NP_609938;, nucleotide= NM_136094;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity
FlyMine data for FBgn0032749.
VDRC has 6 RNAi stocks for FBgn0032749 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.50None
Head1 ± 00 of 4 0.40None
Eye3 ± 20 of 4 1.37None
Thoracicoabdominal ganglion1 ± 00 of 4 0.50None
Salivary gland4 ± 10 of 4 1.42None
Crop2 ± 00 of 4 1.00None
Midgut1 ± 00 of 4 0.50None
Tubule2 ± 00 of 4 0.90None
Hindgut1 ± 00 of 4 0.40None
Heart1 ± 00 of 4 0.45None
Fat body3 ± 20 of 4 1.11None
Ovary0 ± 00 of 4 0.30None
Testis9 ± 10 of 4 3.40Up
Male accessory glands3 ± 10 of 4 1.20None
Virgin spermatheca1 ± 00 of 4 0.69None
Mated spermatheca6 ± 20 of 4 2.46None
Adult carcass2 ± 00 of 4 0.80None
Larval CNS2 ± 10 of 4 0.85None
Larval Salivary gland8 ± 30 of 4 2.88None
Larval midgut6 ± 00 of 4 2.17None
Larval tubule0 ± 00 of 4 0.30None
Larval hindgut3 ± 00 of 4 1.12None
Larval fat body1 ± 00 of 4 0.60None
Larval trachea6 ± 10 of 4 2.21None
Larval carcass2 ± 00 of 4 0.97None
S2 cells (growing)2 ± 00 of 4 0.80None
Whole fly2 ± 10 of 4

Looking for FBgn0032749. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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