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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032750 through 18771 annotations produced 1 hits



(CG10495):

Annotation Number : CG10495
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032750
Gbrowse : chr2L:19063324-19064726 (+) // 100.0 //
Probeset : 1635555_at
Accessions : protein= NP_609939;, nucleotide= NM_136095;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0017150 // tRNA dihydrouridine synthase activit
FlyMine data for FBgn0032750.
BDGP gene expression has embryonic in situ data for CG10495: 8 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0032750 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain47 14 of 4 0.70Down
Head35 34 of 4 0.50Down
Eye25 14 of 4 0.36Down
Thoracicoabdominal ganglion53 34 of 4 0.80Down
Salivary gland63 14 of 4 0.88Down
Crop43 34 of 4 0.60Down
Midgut31 24 of 4 0.40Down
Tubule30 14 of 4 0.40Down
Hindgut38 34 of 4 0.50Down
Heart27 24 of 4 0.38Down
Fat body35 34 of 4 0.50Down
Ovary166 24 of 4 2.30Up
Testis34 14 of 4 0.50Down
Male accessory glands43 24 of 4 0.60Down
Virgin spermatheca36 24 of 4 0.52Down
Mated spermatheca46 24 of 4 0.65Down
Adult carcass36 24 of 4 0.50Down
Larval CNS59 44 of 4 0.83Down
Larval Salivary gland45 54 of 4 0.64Down
Larval midgut21 24 of 4 0.30Down
Larval tubule24 24 of 4 0.30Down
Larval hindgut35 14 of 4 0.50Down
Larval fat body25 34 of 4 0.40Down
Larval trachea58 64 of 4 0.82Down
Larval carcass32 34 of 4 0.45Down
S2 cells (growing)50 44 of 4 0.71Down
Whole fly71 24 of 4

Looking for FBgn0032750. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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