Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032785 through 18771 annotations produced 1 hits



(CG10026):

Annotation Number : CG10026
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032785
Gbrowse : chr2L:19455677-19457724 (+) // 100.0 //
Probeset : 1624468_a_at
Accessions : protein= NP_609968; /// NP_724195; /// NP_724196;, nucleotide= NM_136124; /// NM_165301; /// NM_165302;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0008431 // vitamin E binding // inferred from
FlyMine data for FBgn0032785.
BDGP gene expression has embryonic in situ data for CG10026: 20 pix of staining in 3 body parts.
Homophila reports that CG10026 is a close match (1e-24) to human gene AVED;TTP1;TTPA (NP_000361), a gene associated with Ataxia with isolated vitamin E deficiency, 277460 (3).
VDRC has 2 RNAi stocks for FBgn0032785 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain8 12 of 4 0.10Down
Head263 154 of 4 3.20Up
Eye50 34 of 4 0.62Down
Thoracicoabdominal ganglion10 11 of 4 0.10Down
Salivary gland302 104 of 4 3.73Up
Crop152 114 of 4 1.90Up
Midgut69 54 of 4 0.90None
Tubule28 34 of 4 0.30Down
Hindgut1235 524 of 415.20Up
Heart241 204 of 4 2.98Up
Fat body27 14 of 4 0.34Down
Ovary3 00 of 4 0.00Down
Testis82 44 of 4 1.00None
Male accessory glands106 144 of 4 1.30None
Virgin spermatheca42 64 of 4 0.53Down
Mated spermatheca51 54 of 4 0.64Down
Adult carcass108 84 of 4 1.30Up
Larval CNS3 10 of 4 0.04Down
Larval Salivary gland32 24 of 4 0.40Down
Larval midgut10 03 of 4 0.13Down
Larval tubule7 12 of 4 0.10Down
Larval hindgut70 134 of 4 0.87None
Larval fat body1842 2224 of 422.70Up
Larval trachea58 164 of 4 0.73None
Larval carcass603 414 of 4 7.45Up
S2 cells (growing)275 74 of 4 3.41Up
Whole fly81 04 of 4

Looking for FBgn0032785. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime