Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032799 through 18771 annotations produced 1 hits



(CG10166):

Annotation Number : CG10166
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032799
Gbrowse : chr2L:19525473-19526324 (-) // 100.0 //
Probeset : 1638217_at
Accessions : protein= NP_609980;, nucleotide= NM_136136;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation
Interpro : "0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from sequence or structural similarity //
FlyMine data for FBgn0032799.
Homophila reports that CG10166 is a close match (5e-108) to human gene CDGIE;DPM1;MPDS (NP_003850), a gene associated with Congenital disorder of glycosylation, type Ie, 608799 (3).
VDRC has 4 RNAi stocks for FBgn0032799 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain166 84 of 4 0.80None
Head224 84 of 4 1.10None
Eye260 94 of 4 1.29None
Thoracicoabdominal ganglion194 44 of 4 1.00None
Salivary gland919 344 of 4 4.55Up
Crop225 74 of 4 1.10None
Midgut380 94 of 4 1.90Up
Tubule240 194 of 4 1.20None
Hindgut266 64 of 4 1.30None
Heart149 34 of 4 0.74None
Fat body187 154 of 4 0.93None
Ovary243 14 of 4 1.20None
Testis130 34 of 4 0.60Down
Male accessory glands834 374 of 4 4.10Up
Virgin spermatheca278 24 of 4 1.38Up
Mated spermatheca345 224 of 4 1.71Up
Adult carcass205 134 of 4 1.00None
Larval CNS284 164 of 4 1.41Up
Larval Salivary gland914 594 of 4 4.52Up
Larval midgut235 94 of 4 1.16None
Larval tubule271 14 of 4 1.30None
Larval hindgut275 14 of 4 1.36Up
Larval fat body305 254 of 4 1.50Up
Larval trachea263 394 of 4 1.30None
Larval carcass224 84 of 4 1.11None
S2 cells (growing)594 44 of 4 2.94Up
Whole fly202 224 of 4

Looking for FBgn0032799. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime