FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032800 through 18771 annotations produced 1 hits

(CG10137):

Annotation Number : CG10137
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032800
Gbrowse : chr2L:19526685-19532992 (+) // 100.0 //
Probeset : 1641339_at
Accessions : protein= NP_609981;, nucleotide= NM_136137;
Interpro : 0016594 // glycine binding // inferred from sequence or structural similarity /// 0016595 // glutamate binding // inferr
FlyMine data for FBgn0032800.
BDGP gene expression has embryonic in situ data for CG10137: 4 pix of staining in 1 body parts.
BioGrid reports that CG10137 interacts with CG8322 .
TRiP has 1 RNAi stocks for FBgn0032800 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032800 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	341 ± 9	4 of 4	15.20	Up
Head	94 ± 4	4 of 4	4.20	Up
Eye	56 ± 3	4 of 4	2.54	Up
Thoracicoabdominal ganglion	284 ± 14	4 of 4	12.70	Up
Salivary gland	21 ± 7	2 of 4	0.97	None
Crop	61 ± 6	4 of 4	2.70	Up
Midgut	24 ± 0	4 of 4	1.10	None
Tubule	44 ± 1	4 of 4	2.00	Up
Hindgut	40 ± 1	4 of 4	1.80	Up
Heart	11 ± 2	3 of 4	0.52	Down
Fat body	22 ± 2	3 of 4	1.02	None
Ovary	9 ± 0	3 of 4	0.40	Down
Testis	16 ± 0	4 of 4	0.70	Down
Male accessory glands	16 ± 1	1 of 4	0.70	Down
Virgin spermatheca	26 ± 1	4 of 4	1.19	None
Mated spermatheca	25 ± 4	4 of 4	1.14	None
Adult carcass	33 ± 3	4 of 4	1.50	Up
Larval CNS	114 ± 4	4 of 4	5.11	Up
Larval Salivary gland	33 ± 3	4 of 4	1.48	Up
Larval midgut	24 ± 0	4 of 4	1.11	None
Larval tubule	53 ± 1	4 of 4	2.40	Up
Larval hindgut	26 ± 0	4 of 4	1.16	None
Larval fat body	5 ± 1	0 of 4	0.20	Down
Larval trachea	15 ± 5	3 of 4	0.70	None
Larval carcass	17 ± 3	4 of 4	0.78	None
S2 cells (growing)	54 ± 3	4 of 4	2.42	Up
Whole fly	22 ± 1	4 of 4

Looking for FBgn0032800. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720