FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032803 through 18771 annotations produced 1 hits

(CG13082):

Annotation Number : CG13082
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032803
Gbrowse : chr2L:19538428-19539910 (+) // 100.0 //
Probeset : 1626166_at
Accessions : protein= NP_609984;, nucleotide= NM_136140;
FlyMine data for FBgn0032803.
VDRC has 2 RNAi stocks for FBgn0032803 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	0 of 4	0.90	None
Head	15 ± 2	4 of 4	2.20	Up
Eye	6 ± 1	0 of 4	0.87	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.30	Down
Salivary gland	7 ± 2	1 of 4	1.04	None
Crop	18 ± 1	3 of 4	2.60	Up
Midgut	1 ± 0	0 of 4	0.20	Down
Tubule	2 ± 0	0 of 4	0.30	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	2 ± 1	0 of 4	0.42	None
Fat body	2 ± 2	0 of 4	0.28	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	0 ± 0	0 of 4	0.10	Down
Male accessory glands	1 ± 0	0 of 4	0.20	Down
Virgin spermatheca	0 ± 0	0 of 4	0.05	Down
Mated spermatheca	0 ± 0	0 of 4	0.08	Down
Adult carcass	17 ± 3	2 of 4	2.50	Up
Larval CNS	2 ± 1	0 of 4	0.31	Down
Larval Salivary gland	1 ± 0	0 of 4	0.17	Down
Larval midgut	3 ± 1	0 of 4	0.43	None
Larval tubule	9 ± 1	1 of 4	1.30	None
Larval hindgut	189 ± 27	4 of 4	26.82	Up
Larval fat body	3 ± 1	0 of 4	0.40	None
Larval trachea	78 ± 26	4 of 4	11.17	Up
Larval carcass	10 ± 2	1 of 4	1.47	None
S2 cells (growing)	0 ± 0	0 of 4	0.06	Down
Whole fly	7 ± 1	0 of 4

Looking for FBgn0032803. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720