Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: 16/4/2014: We have just migrated to a new server (the old one ran XP!).
Latest news: Please report unexpected behaviours to julian.dow @ glasgow. ac. uk
Latest news: Our alternative view (http://flyatlas.gla.ac.uk/flyatlas/index.html) is still available.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032815 through 18771 annotations produced 1 hits



(CG10462):

Annotation Number : CG10462
Flybase ID : FBgn0032815
Gbrowse : chr2L:19732167-19735948 (-) // 100.0 //
Probeset : 1625530_at
Accessions : protein= NP_001033914; /// NP_001033915; /// NP_609996;, nucleotide= NM_001038825; /// NM_001038826; /// NM_136152;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0032815.
BDGP gene expression has embryonic in situ data for CG10462: 27 pix of staining in 9 body parts.
Homophila reports that CG10462 is a close match (2e-11) to human gene HTX;HTX1;ZIC3 (NP_003404), a gene associated with Heterotaxy, X-linked visceral, 306955 (3).
BioGrid reports that CG10462 interacts with CG3879 CG10694 CG17592 CG2116 CG3847 CG7911 .
TRiP has 2 RNAi stocks for FBgn0032815 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032815 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain33 34 of 4 0.30Down
Head78 34 of 4 0.80Down
Eye361 154 of 4 3.55Up
Thoracicoabdominal ganglion57 34 of 4 0.60Down
Salivary gland162 74 of 4 1.59Up
Crop118 84 of 4 1.20None
Midgut84 34 of 4 0.80Down
Tubule221 164 of 4 2.20Up
Hindgut97 44 of 4 1.00None
Heart112 64 of 4 1.11None
Fat body109 134 of 4 1.07None
Ovary238 34 of 4 2.30Up
Testis50 44 of 4 0.50Down
Male accessory glands176 124 of 4 1.70Up
Virgin spermatheca293 34 of 4 2.88Up
Mated spermatheca280 194 of 4 2.75Up
Adult carcass80 54 of 4 0.80Down
Larval CNS144 164 of 4 1.42Up
Larval Salivary gland169 54 of 4 1.66Up
Larval midgut79 14 of 4 0.78Down
Larval tubule117 14 of 4 1.10Up
Larval hindgut130 24 of 4 1.28Up
Larval fat body71 14 of 4 0.70Down
Larval trachea229 224 of 4 2.25Up
Larval carcass114 64 of 4 1.13None
S2 cells (growing)171 34 of 4 1.68Up
Whole fly101 14 of 4

Looking for FBgn0032815. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime