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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032819 through 18771 annotations produced 1 hits



(CG10463):

Annotation Number : CG10463
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032819
Gbrowse : chr2L:19758878-19760986 (+) // 100.0 //
Probeset : 1640143_at
Accessions : protein= NP_610000;, nucleotide= NM_136156;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred fro
FlyMine data for FBgn0032819.
BioGrid reports that CG10463 interacts with CG32183 .
VDRC has 3 RNAi stocks for FBgn0032819 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain34 04 of 4 0.50Down
Head26 14 of 4 0.40Down
Eye28 04 of 4 0.47Down
Thoracicoabdominal ganglion34 24 of 4 0.60Down
Salivary gland38 31 of 4 0.62Down
Crop40 14 of 4 0.60Down
Midgut41 20 of 4 0.70Down
Tubule31 33 of 4 0.50Down
Hindgut32 14 of 4 0.50Down
Heart27 04 of 4 0.44Down
Fat body35 44 of 4 0.57Down
Ovary118 24 of 4 1.90Up
Testis8 02 of 4 0.10Down
Male accessory glands66 84 of 4 1.10None
Virgin spermatheca21 41 of 4 0.34Down
Mated spermatheca31 14 of 4 0.51Down
Adult carcass36 23 of 4 0.60Down
Larval CNS94 24 of 4 1.52Up
Larval Salivary gland40 54 of 4 0.66Down
Larval midgut31 00 of 4 0.50Down
Larval tubule18 04 of 4 0.30Down
Larval hindgut37 44 of 4 0.61Down
Larval fat body24 33 of 4 0.40Down
Larval trachea89 144 of 4 1.43Up
Larval carcass51 114 of 4 0.82None
S2 cells (growing)62 24 of 4 1.00None
Whole fly62 24 of 4

Looking for FBgn0032819. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime