Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0032839 through 18771 annotations produced 1 hits


/// (CG10659 /// DsimCG10659):

Annotation Number : CG10659
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032839
Gbrowse : chr2L:20025112-20025781 (-) // 100.0 //
Probeset : 1633147_at
Accessions : protein= NP_610018;, nucleotide= NM_136174;
Interpro : 0008080 // N-acetyltransferase activity // inferred from electronic annotation
FlyMine data for FBgn0032839.
VDRC has 2 RNAi stocks for FBgn0032839 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head2 ± 20 of 4 0.10Down
Eye0 ± 00 of 4 0.04Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland5 ± 20 of 4 0.20None
Crop2 ± 00 of 4 0.10Down
Midgut1032 ± 674 of 441.30Up
Tubule2 ± 00 of 4 0.10Down
Hindgut0 ± 00 of 4 0.00Down
Heart1 ± 10 of 4 0.08Down
Fat body3 ± 20 of 4 0.15None
Ovary1 ± 00 of 4 0.10Down
Testis2 ± 10 of 4 0.10Down
Male accessory glands5 ± 20 of 4 0.20None
Virgin spermatheca1 ± 00 of 4 0.05Down
Mated spermatheca3 ± 10 of 4 0.14None
Adult carcass5 ± 20 of 4 0.20None
Larval CNS1 ± 10 of 4 0.04Down
Larval Salivary gland1 ± 00 of 4 0.06Down
Larval midgut99 ± 64 of 4 3.96Up
Larval tubule1 ± 00 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.05Down
Larval fat body2 ± 10 of 4 0.10Down
Larval trachea1 ± 00 of 4 0.04Down
Larval carcass1 ± 00 of 4 0.04Down
S2 cells (growing)0 ± 00 of 4 0.03Down
Whole fly25 ± 74 of 4

Looking for FBgn0032839. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime