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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032845 through 18771 annotations produced 1 hits



(CG10747):

Annotation Number : CG10747
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032845
Gbrowse : chr2L:20089633-20091220 (-) // 99.67 //
Probeset : 1633716_at
Accessions : protein= NP_610022;, nucleotide= NM_136178;
Interpro : 0004629 // phospholipase C activity // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase a
FlyMine data for FBgn0032845.
VDRC has 1 RNAi stocks for FBgn0032845 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain139 ± 44 of 4 1.90Up
Head109 ± 44 of 4 1.50Up
Eye75 ± 54 of 4 1.01None
Thoracicoabdominal ganglion157 ± 54 of 4 2.10Up
Salivary gland113 ± 14 of 4 1.52Up
Crop348 ± 54 of 4 4.60Up
Midgut120 ± 14 of 4 1.60Up
Tubule98 ± 34 of 4 1.30Up
Hindgut223 ± 44 of 4 3.00Up
Heart110 ± 64 of 4 1.47Up
Fat body84 ± 144 of 4 1.13None
Ovary66 ± 44 of 4 0.90None
Testis48 ± 54 of 4 0.60Down
Male accessory glands85 ± 44 of 4 1.10None
Virgin spermatheca82 ± 44 of 4 1.09None
Mated spermatheca95 ± 24 of 4 1.27Up
Adult carcass99 ± 24 of 4 1.30Up
Larval CNS53 ± 24 of 4 0.71Down
Larval Salivary gland66 ± 54 of 4 0.89None
Larval midgut46 ± 24 of 4 0.62Down
Larval tubule100 ± 24 of 4 1.30Up
Larval hindgut107 ± 134 of 4 1.43None
Larval fat body75 ± 64 of 4 1.00None
Larval trachea225 ± 254 of 4 3.00Up
Larval carcass49 ± 34 of 4 0.66Down
S2 cells (growing)45 ± 24 of 4 0.60Down
Whole fly75 ± 44 of 4

Looking for FBgn0032845. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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