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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032847 through 18771 annotations produced 1 hits



TBP-associated factor 18kD (Taf13):

Annotation Number : CG10756
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032847
Gbrowse : chr2L:20093084-20093846 (-) // 100.0 //
Probeset : 1628630_at
Accessions : protein= NP_610024;, nucleotide= NM_136180;
Pathway : 0005669 // transcription factor TFIID complex // inferred from sequence or structural similarity
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003702 // RNA polymerase II transcription factor acti
FlyMine data for FBgn0032847.
BDGP gene expression has embryonic in situ data for Taf13: 21 pix of staining in 2 body parts.
BioGrid reports that CG10756 interacts with CG4079 CG5930 .
VDRC has 2 RNAi stocks for FBgn0032847 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain151 64 of 4 1.20None
Head94 14 of 4 0.70Down
Eye111 94 of 4 0.86None
Thoracicoabdominal ganglion125 44 of 4 1.00None
Salivary gland51 64 of 4 0.40Down
Crop75 74 of 4 0.60Down
Midgut75 34 of 4 0.60Down
Tubule72 44 of 4 0.60Down
Hindgut73 14 of 4 0.60Down
Heart71 14 of 4 0.55Down
Fat body44 74 of 4 0.35Down
Ovary201 24 of 4 1.60Up
Testis172 04 of 4 1.30Up
Male accessory glands77 64 of 4 0.60Down
Virgin spermatheca34 14 of 4 0.27Down
Mated spermatheca57 54 of 4 0.44Down
Adult carcass53 14 of 4 0.40Down
Larval CNS190 44 of 4 1.47Up
Larval Salivary gland115 94 of 4 0.89None
Larval midgut33 14 of 4 0.26Down
Larval tubule73 34 of 4 0.60Down
Larval hindgut48 34 of 4 0.38Down
Larval fat body64 34 of 4 0.50Down
Larval trachea131 184 of 4 1.02None
Larval carcass42 14 of 4 0.33Down
S2 cells (growing)337 114 of 4 2.61Up
Whole fly129 104 of 4

Looking for FBgn0032847. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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