Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032884 through 18771 annotations produced 1 hits



Pomp (Pomp):

Annotation Number : CG9324
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032884
Gbrowse : chr2L:20787648-20789100 (+) // 100.0 //
Probeset : 1625879_at
Accessions : protein= NP_610057;, nucleotide= NM_136213;
Pathway : 0000502 // proteasome complex // non-traceable author statement
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032884.
BDGP gene expression has embryonic in situ data for CG9324: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0032884 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain233 ± 94 of 4 0.80None
Head341 ± 254 of 4 1.20None
Eye232 ± 184 of 4 0.80None
Thoracicoabdominal ganglion253 ± 144 of 4 0.90None
Salivary gland228 ± 234 of 4 0.79None
Crop459 ± 174 of 4 1.60Up
Midgut259 ± 134 of 4 0.90None
Tubule246 ± 134 of 4 0.80Down
Hindgut268 ± 24 of 4 0.90None
Heart667 ± 444 of 4 2.29Up
Fat body1154 ± 814 of 4 3.97Up
Ovary432 ± 94 of 4 1.50Up
Testis232 ± 134 of 4 0.80None
Male accessory glands302 ± 144 of 4 1.00None
Virgin spermatheca552 ± 674 of 4 1.90Up
Mated spermatheca446 ± 144 of 4 1.53Up
Adult carcass434 ± 304 of 4 1.50Up
Larval CNS835 ± 1094 of 4 2.87Up
Larval Salivary gland671 ± 474 of 4 2.31Up
Larval midgut527 ± 414 of 4 1.81Up
Larval tubule803 ± 654 of 4 2.80Up
Larval hindgut606 ± 314 of 4 2.08Up
Larval fat body468 ± 224 of 4 1.60Up
Larval trachea338 ± 424 of 4 1.16None
Larval carcass1161 ± 154 of 4 3.99Up
S2 cells (growing)442 ± 204 of 4 1.52Up
Whole fly291 ± 354 of 4

Looking for FBgn0032884. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime