FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032889 through 18771 annotations produced 1 hits

chr2L:20824435-20827744 (+) // 100.0 // ():

Annotation Number : CG9331
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1635390_s_at
Accessions : protein= , nucleotide= NP_610062; /// NP_724293; /// NP_788080; /// NP_788081; /// NP_995737;
Pathway : 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from
FlyMine data for full length.
Homophila reports that CG9331 is a close match (3e-23) to human gene PHGDH (NP_006614), a gene associated with Phosphoglycerate dehydrogenase deficiency, 601815 (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	208 ± 7	4 of 4	0.40	Down
Head	779 ± 82	4 of 4	1.50	Up
Eye	391 ± 38	4 of 4	0.74	Down
Thoracicoabdominal ganglion	253 ± 6	4 of 4	0.50	Down
Salivary gland	226 ± 10	4 of 4	0.43	Down
Crop	244 ± 7	4 of 4	0.50	Down
Midgut	3055 ± 108	4 of 4	5.80	Up
Tubule	2574 ± 86	4 of 4	4.90	Up
Hindgut	653 ± 29	4 of 4	1.20	Up
Heart	1540 ± 98	4 of 4	2.91	Up
Fat body	1938 ± 245	4 of 4	3.66	Up
Ovary	116 ± 3	4 of 4	0.20	Down
Testis	27 ± 2	0 of 4	0.10	Down
Male accessory glands	65 ± 5	0 of 4	0.10	Down
Virgin spermatheca	1261 ± 55	4 of 4	2.38	Up
Mated spermatheca	978 ± 133	4 of 4	1.85	Up
Adult carcass	1533 ± 78	4 of 4	2.90	Up
Larval CNS	214 ± 29	4 of 4	0.40	Down
Larval Salivary gland	374 ± 27	4 of 4	0.71	Down
Larval midgut	1543 ± 62	4 of 4	2.92	Up
Larval tubule	745 ± 90	4 of 4	1.40	None
Larval hindgut	916 ± 33	4 of 4	1.73	Up
Larval fat body	942 ± 58	4 of 4	1.80	Up
Larval trachea	877 ± 37	4 of 4	1.66	Up
Larval carcass	1418 ± 166	4 of 4	2.68	Up
S2 cells (growing)	212 ± 19	4 of 4	0.40	Down
Whole fly	529 ± 39	4 of 4

Looking for FBgn0032889. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720