FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032891 through 18771 annotations produced 1 hits

Oseg5 (Oseg5):

Annotation Number : CG9333
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032891
Gbrowse : chr2L:20832857-20835607 (-) // 100.0 //
Probeset : 1640383_at
Accessions : protein= NP_610064;, nucleotide= NM_136220;
FlyMine data for FBgn0032891.
Homophila reports that CG9333 is a close match (3e-141) to human gene ATD2;IFT80;KIAA1374;WDR56 (NP_065851), a gene associated with Asphyxiating thoracic dystrophy 2, 611263 (3).
VDRC has 2 RNAi stocks for FBgn0032891 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	1.30	None
Head	3 ± 2	0 of 4	3.70	None
Eye	2 ± 1	0 of 4	2.76	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.00	None
Salivary gland	3 ± 1	0 of 4	3.38	None
Crop	1 ± 0	0 of 4	1.80	None
Midgut	5 ± 2	0 of 4	5.30	None
Tubule	2 ± 0	0 of 4	2.80	Up
Hindgut	1 ± 0	0 of 4	1.40	None
Heart	3 ± 1	0 of 4	2.90	None
Fat body	1 ± 0	0 of 4	1.52	None
Ovary	1 ± 0	0 of 4	1.00	None
Testis	4 ± 1	0 of 4	4.60	None
Male accessory glands	4 ± 2	0 of 4	4.20	None
Virgin spermatheca	1 ± 0	0 of 4	1.31	None
Mated spermatheca	1 ± 0	0 of 4	1.26	None
Adult carcass	3 ± 0	0 of 4	3.00	None
Larval CNS	2 ± 1	0 of 4	2.02	None
Larval Salivary gland	4 ± 1	0 of 4	3.88	None
Larval midgut	3 ± 0	0 of 4	3.36	Up
Larval tubule	2 ± 1	0 of 4	2.60	None
Larval hindgut	3 ± 1	0 of 4	3.17	None
Larval fat body	1 ± 0	0 of 4	1.60	None
Larval trachea	2 ± 1	0 of 4	2.07	None
Larval carcass	2 ± 0	0 of 4	2.69	Up
S2 cells (growing)	7 ± 2	0 of 4	6.88	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0032891. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720