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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032915 through 18771 annotations produced 1 hits



(CG12050):

Annotation Number : CG12050
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032915
Gbrowse : chr2L:21094965-21102392 (-) // 99.84 //
Probeset : 1632123_at
Accessions : protein= NP_610086;, nucleotide= NM_136242;
FlyMine data for FBgn0032915.
TRiP has 1 RNAi stocks for FBgn0032915 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032915 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain45 ± 24 of 4 0.40Down
Head42 ± 54 of 4 0.40Down
Eye38 ± 14 of 4 0.31Down
Thoracicoabdominal ganglion50 ± 34 of 4 0.40Down
Salivary gland75 ± 74 of 4 0.62Down
Crop52 ± 34 of 4 0.40Down
Midgut57 ± 34 of 4 0.50Down
Tubule63 ± 94 of 4 0.50Down
Hindgut43 ± 24 of 4 0.40Down
Heart47 ± 14 of 4 0.39Down
Fat body68 ± 84 of 4 0.56Down
Ovary254 ± 24 of 4 2.10Up
Testis149 ± 84 of 4 1.20Up
Male accessory glands126 ± 104 of 4 1.00None
Virgin spermatheca70 ± 64 of 4 0.58Down
Mated spermatheca88 ± 74 of 4 0.73Down
Adult carcass54 ± 104 of 4 0.40Down
Larval CNS130 ± 114 of 4 1.08None
Larval Salivary gland93 ± 94 of 4 0.77None
Larval midgut55 ± 64 of 4 0.46Down
Larval tubule23 ± 14 of 4 0.20Down
Larval hindgut80 ± 114 of 4 0.66Down
Larval fat body54 ± 143 of 4 0.40Down
Larval trachea104 ± 164 of 4 0.86None
Larval carcass123 ± 314 of 4 1.02None
S2 cells (growing)156 ± 14 of 4 1.29Up
Whole fly121 ± 54 of 4

Looking for FBgn0032915. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime