Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032924 through 18771 annotations produced 1 hits



(CG9247):

Annotation Number : CG9247
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032924
Gbrowse : chr2L:21160634-21163087 (-) // 100.0 //
Probeset : 1634849_at
Accessions : protein= NP_610094;, nucleotide= NM_136250;
Pathway : nucleoside
Interpro : nucleotide and nucleic acid metabolic process // inferred from electronic annotation"
FlyMine data for FBgn0032924.
VDRC has 2 RNAi stocks for FBgn0032924 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain167 ± 34 of 4 0.80Down
Head135 ± 114 of 4 0.60Down
Eye153 ± 74 of 4 0.72Down
Thoracicoabdominal ganglion201 ± 74 of 4 0.90None
Salivary gland227 ± 74 of 4 1.07None
Crop124 ± 74 of 4 0.60Down
Midgut81 ± 84 of 4 0.40Down
Tubule108 ± 64 of 4 0.50Down
Hindgut102 ± 34 of 4 0.50Down
Heart93 ± 24 of 4 0.44Down
Fat body93 ± 144 of 4 0.44Down
Ovary441 ± 74 of 4 2.10Up
Testis50 ± 44 of 4 0.20Down
Male accessory glands388 ± 74 of 4 1.80Up
Virgin spermatheca151 ± 254 of 4 0.71None
Mated spermatheca191 ± 124 of 4 0.90None
Adult carcass94 ± 24 of 4 0.40Down
Larval CNS169 ± 134 of 4 0.80Down
Larval Salivary gland135 ± 54 of 4 0.64Down
Larval midgut59 ± 34 of 4 0.28Down
Larval tubule74 ± 44 of 4 0.40Down
Larval hindgut84 ± 44 of 4 0.40Down
Larval fat body97 ± 64 of 4 0.50Down
Larval trachea136 ± 84 of 4 0.64Down
Larval carcass73 ± 34 of 4 0.35Down
S2 cells (growing)98 ± 34 of 4 0.46Down
Whole fly212 ± 54 of 4

Looking for FBgn0032924. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime