Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032940 through 18771 annotations produced 1 hits



Mlx interactor (Mio):

Annotation Number : CG18362
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032940
Gbrowse : chr2L:21286077-21310006 (-) // 100.0 //
Probeset : 1628873_s_at
Accessions : protein= NP_001163032; /// NP_001163033; /// NP_001163034; /// NP_001163035; /// NP_001163036; /// NP_001163037; /// NP_001163038; /// NP_001163039; /// NP_610105; /// NP_724325; /// NP_724326; /// NP_724327; /// NP_724328;, nucleotide= NM_001169561; /// NM_001169562; /// NM_001169563; /// NM_001169564; /// NM_001169565; /// NM_001169566; /// NM_001169567; /// NM_001169568; /// NM_136261; /// NM_165366; /// NM_165367; /// NM_165368; /// NM_165369;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0032940.
BDGP gene expression has embryonic in situ data for Mio: 22 pix of staining in 10 body parts.
BioGrid reports that CG18362 interacts with CG3350 CG2216 CG4071 CG6569 CG8614 .
TRiP has 1 RNAi stocks for FBgn0032940 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032940 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain266 74 of 4 1.00None
Head247 144 of 4 0.90None
Eye258 134 of 4 0.99None
Thoracicoabdominal ganglion242 14 of 4 0.90None
Salivary gland343 124 of 4 1.32Up
Crop254 74 of 4 1.00None
Midgut209 84 of 4 0.80Down
Tubule1592 664 of 4 6.10Up
Hindgut196 54 of 4 0.80Down
Heart473 194 of 4 1.82Up
Fat body786 314 of 4 3.02Up
Ovary350 74 of 4 1.30Up
Testis98 44 of 4 0.40Down
Male accessory glands539 194 of 4 2.10Up
Virgin spermatheca861 594 of 4 3.31Up
Mated spermatheca666 224 of 4 2.56Up
Adult carcass475 124 of 4 1.80Up
Larval CNS205 44 of 4 0.79Down
Larval Salivary gland298 94 of 4 1.14None
Larval midgut402 184 of 4 1.55Up
Larval tubule628 314 of 4 2.40Up
Larval hindgut144 74 of 4 0.56Down
Larval fat body546 374 of 4 2.10Up
Larval trachea215 214 of 4 0.83Down
Larval carcass159 54 of 4 0.61Down
S2 cells (growing)386 54 of 4 1.48Up
Whole fly260 124 of 4

Looking for FBgn0032940. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime