FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032971 through 18771 annotations produced 1 hits

CG6691 (ttm3):

Annotation Number : CG6691
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032971
Gbrowse : chr2L:22079671-22080719 (+) // 100.0 //
Probeset : 1632725_at
Accessions : protein= NP_610130;, nucleotide= NM_136286;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred
Interpro : 0004722 // protein serine/threonine phosphatase activity // inferred from sequence or structural similarity /// 0004725
FlyMine data for FBgn0032971.
VDRC has 1 RNAi stocks for FBgn0032971 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	Down
Head	0 ± 0	0 of 4	0.00	Down
Eye	1 ± 0	0 of 4	0.04	Down
Thoracicoabdominal ganglion	1 ± 1	0 of 4	0.00	Down
Salivary gland	1 ± 0	0 of 4	0.03	Down
Crop	2 ± 1	0 of 4	0.00	Down
Midgut	2 ± 1	0 of 4	0.10	Down
Tubule	0 ± 0	0 of 4	0.00	Down
Hindgut	0 ± 0	0 of 4	0.00	Down
Heart	2 ± 0	0 of 4	0.05	Down
Fat body	1 ± 0	0 of 4	0.03	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	757 ± 9	4 of 4	15.40	Up
Male accessory glands	3 ± 2	0 of 4	0.10	Down
Virgin spermatheca	1 ± 0	0 of 4	0.02	Down
Mated spermatheca	0 ± 0	0 of 4	0.02	Down
Adult carcass	1 ± 0	0 of 4	0.00	Down
Larval CNS	0 ± 0	0 of 4	0.01	Down
Larval Salivary gland	2 ± 1	0 of 4	0.05	Down
Larval midgut	3 ± 1	0 of 4	0.07	Down
Larval tubule	0 ± 0	0 of 4	0.00	Down
Larval hindgut	0 ± 0	0 of 4	0.02	Down
Larval fat body	61 ± 36	2 of 4	1.20	None
Larval trachea	3 ± 4	1 of 4	0.06	Down
Larval carcass	1 ± 0	0 of 4	0.03	Down
S2 cells (growing)	0 ± 0	0 of 4	0.02	Down
Whole fly	49 ± 2	4 of 4

Looking for FBgn0032971. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720