Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032986 through 18771 annotations produced 1 hits



(CG3262):

Annotation Number : CG3262
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032986
Gbrowse : chr2L:22239917-22240881 (+) // 100.0 //
Probeset : 1639966_a_at
Accessions : protein= NP_001137853; /// NP_610143;, nucleotide= NM_001144381; /// NM_136299;
Interpro : 0000166 // nucleotide binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred
FlyMine data for FBgn0032986.
BioGrid reports that CG3262 interacts with CG4767 .
VDRC has 1 RNAi stocks for FBgn0032986 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain465 54 of 4 1.90Up
Head274 174 of 4 1.10None
Eye358 134 of 4 1.48Up
Thoracicoabdominal ganglion467 304 of 4 1.90Up
Salivary gland366 254 of 4 1.51Up
Crop160 34 of 4 0.70Down
Midgut421 194 of 4 1.70Up
Tubule591 174 of 4 2.40Up
Hindgut304 84 of 4 1.30Up
Heart382 54 of 4 1.58Up
Fat body396 74 of 4 1.64Up
Ovary251 34 of 4 1.00None
Testis303 104 of 4 1.30Up
Male accessory glands216 94 of 4 0.90None
Virgin spermatheca296 234 of 4 1.22None
Mated spermatheca336 194 of 4 1.39Up
Adult carcass264 114 of 4 1.10None
Larval CNS361 424 of 4 1.49Up
Larval Salivary gland377 54 of 4 1.56Up
Larval midgut387 114 of 4 1.60Up
Larval tubule499 194 of 4 2.10Up
Larval hindgut337 84 of 4 1.39Up
Larval fat body477 404 of 4 2.00Up
Larval trachea389 264 of 4 1.61Up
Larval carcass316 24 of 4 1.31Up
S2 cells (growing)468 44 of 4 1.93Up
Whole fly242 164 of 4

Looking for FBgn0032986. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime