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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033015 through 18771 annotations produced 1 hits



d4 (d4):

Annotation Number : CG2682
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033015
Gbrowse : chr2R:1181590-1183470 (+) // 100.0 //
Probeset : 1628486_a_at
Accessions : protein= NP_610163; /// NP_724404; /// NP_724405;, nucleotide= NM_136319; /// NM_165424; /// NM_165425;
Pathway : 0005634 // nucleus // non-traceable author statement
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 //
FlyMine data for FBgn0033015.
TRiP has 2 RNAi stocks for FBgn0033015 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033015 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain654 124 of 4 1.70Up
Head254 54 of 4 0.70Down
Eye332 124 of 4 0.86None
Thoracicoabdominal ganglion546 94 of 4 1.40Up
Salivary gland204 234 of 4 0.53Down
Crop185 24 of 4 0.50Down
Midgut153 94 of 4 0.40Down
Tubule252 104 of 4 0.70Down
Hindgut182 64 of 4 0.50Down
Heart120 14 of 4 0.31Down
Fat body130 64 of 4 0.34Down
Ovary805 84 of 4 2.10Up
Testis628 114 of 4 1.60Up
Male accessory glands235 134 of 4 0.60Down
Virgin spermatheca211 104 of 4 0.55Down
Mated spermatheca211 94 of 4 0.55Down
Adult carcass119 94 of 4 0.30Down
Larval CNS671 324 of 4 1.74Up
Larval Salivary gland223 124 of 4 0.58Down
Larval midgut138 34 of 4 0.36Down
Larval tubule198 84 of 4 0.50Down
Larval hindgut205 64 of 4 0.53Down
Larval fat body231 234 of 4 0.60Down
Larval trachea294 24 of 4 0.77Down
Larval carcass171 24 of 4 0.44Down
S2 cells (growing)418 54 of 4 1.09None
Whole fly385 164 of 4

Looking for FBgn0033015. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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