Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033043 through 18771 annotations produced 1 hits



Odorant receptor 42b (Or42b):

Annotation Number : CG12754
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033043
Gbrowse : chr2R:1684699-1686017 (-) // 100.0 //
Probeset : 1630195_at
Accessions : protein= NP_523624;, nucleotide= NM_078900;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0033043.
VDRC has 2 RNAi stocks for FBgn0033043 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.60None
Head16 ± 24 of 4 6.10Up
Eye3 ± 10 of 4 1.44None
Thoracicoabdominal ganglion2 ± 00 of 4 0.90None
Salivary gland5 ± 20 of 4 2.13None
Crop4 ± 10 of 4 1.80None
Midgut1 ± 00 of 4 0.50None
Tubule1 ± 00 of 4 0.40Down
Hindgut0 ± 00 of 4 0.30None
Heart0 ± 00 of 4 0.37None
Fat body1 ± 00 of 4 0.41None
Ovary0 ± 00 of 4 0.30None
Testis2 ± 00 of 4 0.90None
Male accessory glands3 ± 00 of 4 1.20None
Virgin spermatheca0 ± 00 of 4 0.34None
Mated spermatheca0 ± 00 of 4 0.29None
Adult carcass3 ± 10 of 4 1.30None
Larval CNS0 ± 00 of 4 0.24None
Larval Salivary gland2 ± 00 of 4 0.78None
Larval midgut0 ± 00 of 4 0.28None
Larval tubule1 ± 10 of 4 0.70None
Larval hindgut2 ± 10 of 4 0.85None
Larval fat body2 ± 10 of 4 1.00None
Larval trachea1 ± 10 of 4 0.63None
Larval carcass3 ± 00 of 4 1.30None
S2 cells (growing)3 ± 10 of 4 1.14None
Whole fly2 ± 10 of 4

Looking for FBgn0033043. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime