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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033050 through 18771 annotations produced 1 hits



PNGase (Pngl):

Annotation Number : CG7865
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033050
Gbrowse : chr2R:1901326-1907654 (+) // 100.0 //
Probeset : 1623650_a_at
Accessions : protein= NP_610192; /// NP_724444;, nucleotide= NM_136348; /// NM_165454;
Pathway : 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electr
Interpro : 0000224 // peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity // inferred from direct assay /// 0000224
FlyMine data for FBgn0033050.
BDGP gene expression has embryonic in situ data for PNGase: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0033050 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain201 ± 44 of 4 1.00None
Head207 ± 94 of 4 1.00None
Eye179 ± 84 of 4 0.85Down
Thoracicoabdominal ganglion185 ± 64 of 4 0.90None
Salivary gland278 ± 54 of 4 1.32Up
Crop214 ± 64 of 4 1.00None
Midgut231 ± 24 of 4 1.10None
Tubule269 ± 104 of 4 1.30Up
Hindgut189 ± 44 of 4 0.90None
Heart238 ± 34 of 4 1.13None
Fat body367 ± 314 of 4 1.74Up
Ovary387 ± 144 of 4 1.80Up
Testis125 ± 44 of 4 0.60Down
Male accessory glands453 ± 144 of 4 2.10Up
Virgin spermatheca472 ± 144 of 4 2.23Up
Mated spermatheca514 ± 134 of 4 2.43Up
Adult carcass212 ± 64 of 4 1.00None
Larval CNS283 ± 124 of 4 1.34Up
Larval Salivary gland301 ± 24 of 4 1.42Up
Larval midgut354 ± 114 of 4 1.67Up
Larval tubule407 ± 44 of 4 1.90Up
Larval hindgut358 ± 114 of 4 1.69Up
Larval fat body213 ± 274 of 4 1.00None
Larval trachea256 ± 124 of 4 1.21Up
Larval carcass231 ± 94 of 4 1.09None
S2 cells (growing)460 ± 44 of 4 2.18Up
Whole fly211 ± 94 of 4

Looking for FBgn0033050. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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