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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033092 through 18771 annotations produced 1 hits



(CG9422):

Annotation Number : CG9422
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033092
Gbrowse : chr2R:2563331-2580095 (+) // 99.51 //
Probeset : 1624668_s_at
Accessions : protein= NP_610227; /// NP_724490;, nucleotide= NM_136383; /// NM_165484;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation
FlyMine data for FBgn0033092.
TRiP has 1 RNAi stocks for FBgn0033092 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033092 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain126 ± 24 of 4 1.20Up
Head60 ± 54 of 4 0.60Down
Eye38 ± 14 of 4 0.37Down
Thoracicoabdominal ganglion83 ± 14 of 4 0.80Down
Salivary gland54 ± 43 of 4 0.52Down
Crop40 ± 44 of 4 0.40Down
Midgut51 ± 44 of 4 0.50Down
Tubule92 ± 74 of 4 0.90None
Hindgut44 ± 14 of 4 0.40Down
Heart47 ± 34 of 4 0.45Down
Fat body61 ± 144 of 4 0.58Down
Ovary235 ± 14 of 4 2.20Up
Testis23 ± 04 of 4 0.20Down
Male accessory glands148 ± 54 of 4 1.40Up
Virgin spermatheca32 ± 14 of 4 0.31Down
Mated spermatheca44 ± 74 of 4 0.43Down
Adult carcass45 ± 54 of 4 0.40Down
Larval CNS176 ± 164 of 4 1.68Up
Larval Salivary gland72 ± 44 of 4 0.70Down
Larval midgut39 ± 34 of 4 0.38Down
Larval tubule48 ± 34 of 4 0.50Down
Larval hindgut71 ± 64 of 4 0.69Down
Larval fat body23 ± 11 of 4 0.20Down
Larval trachea156 ± 164 of 4 1.49Up
Larval carcass79 ± 84 of 4 0.76None
S2 cells (growing)58 ± 34 of 4 0.56Down
Whole fly104 ± 04 of 4

Looking for FBgn0033092. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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