Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033122 through 18771 annotations produced 1 hits



(CG17002):

Annotation Number : CG17002
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033122
Gbrowse : chr2R:2873232-2876429 (+) // 100.0 //
Probeset : 1640184_at
Accessions : protein= NP_610253;, nucleotide= NM_136409;
FlyMine data for FBgn0033122.
BDGP gene expression has embryonic in situ data for CG17002: 4 pix of staining in 1 body parts.
BioGrid reports that CG17002 interacts with CG5053 CG17018 CG17769 CG4818 .
TRiP has 1 RNAi stocks for FBgn0033122 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033122 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain118 64 of 4 1.30Up
Head79 14 of 4 0.90Down
Eye165 64 of 4 1.79Up
Thoracicoabdominal ganglion95 54 of 4 1.00None
Salivary gland115 54 of 4 1.25Up
Crop100 54 of 4 1.10None
Midgut82 64 of 4 0.90None
Tubule40 14 of 4 0.40Down
Hindgut80 24 of 4 0.90Down
Heart43 14 of 4 0.47Down
Fat body38 104 of 4 0.42Down
Ovary225 54 of 4 2.40Up
Testis72 34 of 4 0.80Down
Male accessory glands95 54 of 4 1.00None
Virgin spermatheca59 24 of 4 0.64Down
Mated spermatheca65 34 of 4 0.71Down
Adult carcass63 24 of 4 0.70Down
Larval CNS174 64 of 4 1.89Up
Larval Salivary gland124 24 of 4 1.35Up
Larval midgut61 34 of 4 0.67Down
Larval tubule54 14 of 4 0.60Down
Larval hindgut159 64 of 4 1.73Up
Larval fat body89 44 of 4 1.00None
Larval trachea131 104 of 4 1.42Up
Larval carcass86 14 of 4 0.94None
S2 cells (growing)143 14 of 4 1.56Up
Whole fly92 34 of 4

Looking for FBgn0033122. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime