Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033127 through 18771 annotations produced 1 hits



tetraspanin 42E (Tsp42Ef):

Annotation Number : CG12845
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033127
Gbrowse : chr2R:2912516-2915587 (+) // 100.0 //
Probeset : 1634845_at
Accessions : protein= NP_523632;, nucleotide= NM_078908;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0033127.
BDGP gene expression has embryonic in situ data for Tsp42Ef: 21 pix of staining in 9 body parts.
BioGrid reports that CG12845 interacts with CG8219 .
VDRC has 1 RNAi stocks for FBgn0033127 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain152 ± 74 of 4 1.20Up
Head283 ± 174 of 4 2.20Up
Eye210 ± 154 of 4 1.65Up
Thoracicoabdominal ganglion285 ± 144 of 4 2.20Up
Salivary gland102 ± 94 of 4 0.80None
Crop566 ± 234 of 4 4.40Up
Midgut182 ± 114 of 4 1.40Up
Tubule77 ± 114 of 4 0.60Down
Hindgut261 ± 104 of 4 2.10Up
Heart265 ± 144 of 4 2.08Up
Fat body111 ± 164 of 4 0.87None
Ovary168 ± 44 of 4 1.30Up
Testis42 ± 34 of 4 0.30Down
Male accessory glands107 ± 54 of 4 0.80Down
Virgin spermatheca120 ± 44 of 4 0.95None
Mated spermatheca142 ± 44 of 4 1.12None
Adult carcass195 ± 74 of 4 1.50Up
Larval CNS150 ± 224 of 4 1.18None
Larval Salivary gland160 ± 164 of 4 1.26None
Larval midgut228 ± 234 of 4 1.79Up
Larval tubule384 ± 244 of 4 3.00Up
Larval hindgut251 ± 94 of 4 1.97Up
Larval fat body392 ± 324 of 4 3.10Up
Larval trachea532 ± 394 of 4 4.17Up
Larval carcass351 ± 144 of 4 2.76Up
S2 cells (growing)493 ± 164 of 4 3.87Up
Whole fly127 ± 54 of 4

Looking for FBgn0033127. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime