Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033129 through 18771 annotations produced 1 hits



tetraspanin 42E (Tsp42Eh):

Annotation Number : CG12844
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033129
Gbrowse : chr2R:2921067-2922424 (+) // 100.0 //
Probeset : 1641508_s_at
Accessions : protein= NP_523634; /// NP_724527; /// NP_724528;, nucleotide= NM_078910; /// NM_165505; /// NM_165506;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0033129.
BDGP gene expression has embryonic in situ data for Tsp42Eh: 7 pix of staining in 3 body parts.
VDRC has 4 RNAi stocks for FBgn0033129 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain8 ± 13 of 4 0.10Down
Head114 ± 114 of 4 1.60Up
Eye17 ± 14 of 4 0.24Down
Thoracicoabdominal ganglion7 ± 12 of 4 0.10Down
Salivary gland25 ± 24 of 4 0.34Down
Crop371 ± 84 of 4 5.10Up
Midgut11 ± 23 of 4 0.20Down
Tubule21 ± 13 of 4 0.30Down
Hindgut434 ± 134 of 4 5.90Up
Heart387 ± 264 of 4 5.27Up
Fat body12 ± 14 of 4 0.17Down
Ovary1 ± 00 of 4 0.00Down
Testis23 ± 24 of 4 0.30Down
Male accessory glands7 ± 20 of 4 0.10Down
Virgin spermatheca7 ± 21 of 4 0.10Down
Mated spermatheca13 ± 23 of 4 0.18Down
Adult carcass241 ± 184 of 4 3.30Up
Larval CNS2 ± 10 of 4 0.03Down
Larval Salivary gland3 ± 10 of 4 0.04Down
Larval midgut4 ± 10 of 4 0.07Down
Larval tubule121 ± 44 of 4 1.60Up
Larval hindgut207 ± 34 of 4 2.81Up
Larval fat body4 ± 20 of 4 0.10Down
Larval trachea11 ± 54 of 4 0.16Down
Larval carcass521 ± 404 of 4 7.09Up
S2 cells (growing)3 ± 01 of 4 0.05Down
Whole fly73 ± 14 of 4

Looking for FBgn0033129. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime