Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033132 through 18771 annotations produced 1 hits



CG12143 (Tsp42Ej):

Annotation Number : CG12143
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033132
Gbrowse : chr2R:2927643-2930267 (+) // 100.0 //
Probeset : 1624435_at
Accessions : protein= NP_523636;, nucleotide= NM_078912;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0033132.
BDGP gene expression has embryonic in situ data for Tsp42Ej: 22 pix of staining in 6 body parts.
BioGrid reports that CG12143 interacts with CG6020 .
TRiP has 1 RNAi stocks for FBgn0033132 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033132 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain991 ± 234 of 4 6.40Up
Head1239 ± 234 of 4 8.00Up
Eye4918 ± 1124 of 431.84Up
Thoracicoabdominal ganglion1305 ± 374 of 4 8.50Up
Salivary gland12 ± 30 of 4 0.08Down
Crop50 ± 44 of 4 0.30Down
Midgut6 ± 10 of 4 0.00Down
Tubule3 ± 00 of 4 0.00Down
Hindgut230 ± 74 of 4 1.50Up
Heart706 ± 574 of 4 4.58Up
Fat body12 ± 91 of 4 0.08Down
Ovary5 ± 11 of 4 0.00Down
Testis15 ± 23 of 4 0.10Down
Male accessory glands2 ± 00 of 4 0.00Down
Virgin spermatheca5 ± 20 of 4 0.04Down
Mated spermatheca6 ± 20 of 4 0.04Down
Adult carcass199 ± 234 of 4 1.30None
Larval CNS210 ± 204 of 4 1.36Up
Larval Salivary gland1 ± 00 of 4 0.01Down
Larval midgut8 ± 10 of 4 0.06Down
Larval tubule70 ± 94 of 4 0.50Down
Larval hindgut13 ± 04 of 4 0.09Down
Larval fat body791 ± 924 of 4 5.10Up
Larval trachea81 ± 1511 of 4 0.53None
Larval carcass8 ± 00 of 4 0.05Down
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly154 ± 04 of 4

Looking for FBgn0033132. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime