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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033136 through 18771 annotations produced 1 hits



tetraspanin 42E (Tsp42Eo):

Annotation Number : CG12838
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033136
Gbrowse : chr2R:2942217-2944087 (+) // 100.0 //
Probeset : 1631497_at
Accessions : protein= NP_523641;, nucleotide= NM_078917;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0033136.
VDRC has 2 RNAi stocks for FBgn0033136 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.20Down
Head11 ± 24 of 4 1.00None
Eye6 ± 00 of 4 0.56None
Thoracicoabdominal ganglion3 ± 10 of 4 0.30Down
Salivary gland10 ± 51 of 4 0.90None
Crop68 ± 24 of 4 5.70Up
Midgut13 ± 30 of 4 1.10None
Tubule4 ± 00 of 4 0.40Down
Hindgut68 ± 04 of 4 5.70Up
Heart47 ± 54 of 4 4.00Up
Fat body8 ± 40 of 4 0.72None
Ovary3 ± 11 of 4 0.30Down
Testis5 ± 11 of 4 0.40Down
Male accessory glands9 ± 10 of 4 0.80None
Virgin spermatheca44 ± 24 of 4 3.70Up
Mated spermatheca50 ± 54 of 4 4.21Up
Adult carcass23 ± 52 of 4 1.90None
Larval CNS8 ± 14 of 4 0.73None
Larval Salivary gland14 ± 32 of 4 1.18None
Larval midgut13 ± 14 of 4 1.11None
Larval tubule10 ± 12 of 4 0.90None
Larval hindgut57 ± 34 of 4 4.81Up
Larval fat body18 ± 44 of 4 1.50None
Larval trachea13 ± 44 of 4 1.16None
Larval carcass219 ± 84 of 418.36Up
S2 cells (growing)2 ± 10 of 4 0.23Down
Whole fly12 ± 24 of 4

Looking for FBgn0033136. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime