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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033137 through 18771 annotations produced 1 hits



tetraspanin 42E (Tsp42Ep):

Annotation Number : CG4471
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033137
Gbrowse : chr2R:2943901-2945040 (-) // 100.0 //
Probeset : 1626351_at
Accessions : protein= NP_523642;, nucleotide= NM_078918;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
FlyMine data for FBgn0033137.
VDRC has 2 RNAi stocks for FBgn0033137 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain10 ± 12 of 4 1.60None
Head10 ± 02 of 4 1.50None
Eye6 ± 10 of 4 0.95None
Thoracicoabdominal ganglion15 ± 12 of 4 2.30Up
Salivary gland14 ± 21 of 4 2.18Up
Crop4 ± 10 of 4 0.60None
Midgut12 ± 00 of 4 1.80Up
Tubule13 ± 23 of 4 2.00Up
Hindgut5 ± 10 of 4 0.90None
Heart209 ± 134 of 431.05Up
Fat body7 ± 20 of 4 1.08None
Ovary2 ± 00 of 4 0.30Down
Testis10 ± 13 of 4 1.50None
Male accessory glands14 ± 32 of 4 2.10None
Virgin spermatheca3 ± 20 of 4 0.54None
Mated spermatheca4 ± 10 of 4 0.68None
Adult carcass13 ± 00 of 4 2.00Up
Larval CNS11 ± 24 of 4 1.67Up
Larval Salivary gland64 ± 94 of 4 9.60Up
Larval midgut10 ± 10 of 4 1.60None
Larval tubule85 ± 74 of 412.70Up
Larval hindgut39 ± 64 of 4 5.89Up
Larval fat body6500 ± 7784 of 4963.10Up
Larval trachea10 ± 32 of 4 1.55None
Larval carcass27 ± 34 of 4 4.08Up
S2 cells (growing)6 ± 11 of 4 0.90None
Whole fly6 ± 11 of 4

Looking for FBgn0033137. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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