FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033162 through 18771 annotations produced 1 hits

(CG1707):

Annotation Number : CG1707
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033162
Gbrowse : chr2R:3281050-3283453 (-) // 100.0 //
Probeset : 1637649_at
Accessions : protein= NP_610270;, nucleotide= NM_136426;
Interpro : 0004462 // lactoylglutathione lyase activity // inferred from sequence or structural similarity /// 0004462 // lactoylgl
FlyMine data for FBgn0033162.
Homophila reports that CG1707 is a close match (2e-68) to human gene GLO1 (NP_006699), a gene associated with {Autism, susceptibility to}, 209850 (3).
VDRC has 2 RNAi stocks for FBgn0033162 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	211 ± 8	4 of 4	0.20	Down
Head	764 ± 33	4 of 4	0.90	None
Eye	765 ± 27	4 of 4	0.86	None
Thoracicoabdominal ganglion	365 ± 16	4 of 4	0.40	Down
Salivary gland	1334 ± 31	4 of 4	1.51	Up
Crop	552 ± 13	4 of 4	0.60	Down
Midgut	1626 ± 34	4 of 4	1.80	Up
Tubule	811 ± 40	4 of 4	0.90	None
Hindgut	974 ± 18	4 of 4	1.10	None
Heart	1129 ± 23	4 of 4	1.28	Up
Fat body	1669 ± 130	4 of 4	1.88	Up
Ovary	942 ± 16	4 of 4	1.10	None
Testis	108 ± 0	4 of 4	0.10	Down
Male accessory glands	1628 ± 79	4 of 4	1.80	Up
Virgin spermatheca	1025 ± 36	4 of 4	1.16	None
Mated spermatheca	1059 ± 41	4 of 4	1.20	None
Adult carcass	983 ± 31	4 of 4	1.10	None
Larval CNS	865 ± 20	4 of 4	0.98	None
Larval Salivary gland	1897 ± 43	4 of 4	2.14	Up
Larval midgut	1400 ± 22	4 of 4	1.58	Up
Larval tubule	1791 ± 68	4 of 4	2.00	Up
Larval hindgut	1352 ± 11	4 of 4	1.53	Up
Larval fat body	1253 ± 140	4 of 4	1.40	None
Larval trachea	2217 ± 116	4 of 4	2.50	Up
Larval carcass	1253 ± 91	4 of 4	1.41	Up
S2 cells (growing)	394 ± 8	4 of 4	0.45	Down
Whole fly	885 ± 57	4 of 4

Looking for FBgn0033162. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720