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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033177 through 18771 annotations produced 1 hits



(CG11141):

Annotation Number : CG11141
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033177
Gbrowse : chr2R:3347931-3350900 (-) // 100.0 //
Probeset : 1638447_s_at
Accessions : protein= NP_610282; /// NP_724559;, nucleotide= NM_136438; /// NM_165525;
FlyMine data for FBgn0033177.
VDRC has 3 RNAi stocks for FBgn0033177 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain90 34 of 4 1.30Up
Head48 34 of 4 0.70Down
Eye32 14 of 4 0.48Down
Thoracicoabdominal ganglion88 74 of 4 1.30None
Salivary gland52 43 of 4 0.77None
Crop51 23 of 4 0.70None
Midgut51 14 of 4 0.80None
Tubule32 14 of 4 0.50Down
Hindgut51 34 of 4 0.80None
Heart30 52 of 4 0.45Down
Fat body27 30 of 4 0.40Down
Ovary133 14 of 4 1.90Up
Testis278 94 of 4 4.10Up
Male accessory glands35 30 of 4 0.50Down
Virgin spermatheca19 00 of 4 0.28Down
Mated spermatheca19 21 of 4 0.29Down
Adult carcass44 43 of 4 0.70Down
Larval CNS63 14 of 4 0.93None
Larval Salivary gland57 34 of 4 0.84None
Larval midgut55 44 of 4 0.82None
Larval tubule59 04 of 4 0.90None
Larval hindgut59 44 of 4 0.88None
Larval fat body86 304 of 4 1.30None
Larval trachea47 44 of 4 0.69Down
Larval carcass49 62 of 4 0.73None
S2 cells (growing)153 24 of 4 2.25Up
Whole fly68 64 of 4

Looking for FBgn0033177. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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