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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033207 through 18771 annotations produced 1 hits



(CG12826):

Annotation Number : CG12826
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033207
Gbrowse : chr2R:3558054-3558507 (-) // 100.0 //
Probeset : 1625313_at
Accessions : protein= NP_610312;, nucleotide= NM_136468;
FlyMine data for FBgn0033207.
VDRC has 1 RNAi stocks for FBgn0033207 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.20None
Head2 ± 00 of 4 0.50None
Eye4 ± 00 of 4 0.76None
Thoracicoabdominal ganglion1 ± 00 of 4 0.30None
Salivary gland5 ± 30 of 4 0.92None
Crop3 ± 10 of 4 0.60None
Midgut11 ± 40 of 4 1.90None
Tubule5 ± 00 of 4 0.90None
Hindgut378 ± 84 of 464.70Up
Heart1 ± 00 of 4 0.18None
Fat body1 ± 00 of 4 0.32None
Ovary1 ± 10 of 4 0.30None
Testis8 ± 00 of 4 1.40None
Male accessory glands3 ± 00 of 4 0.50None
Virgin spermatheca2 ± 10 of 4 0.33None
Mated spermatheca1 ± 00 of 4 0.26None
Adult carcass2 ± 00 of 4 0.40None
Larval CNS0 ± 00 of 4 0.17None
Larval Salivary gland12 ± 71 of 4 2.18None
Larval midgut11 ± 50 of 4 1.91None
Larval tubule6 ± 41 of 4 1.20None
Larval hindgut1644 ± 2864 of 4281.02Up
Larval fat body2 ± 00 of 4 0.40None
Larval trachea11 ± 181 of 4 1.88None
Larval carcass340 ± 294 of 458.25Up
S2 cells (growing)4 ± 10 of 4 0.81None
Whole fly5 ± 20 of 4

Looking for FBgn0033207. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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