Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033232 through 18771 annotations produced 1 hits



(CG12159):

Annotation Number : CG12159
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033232
Gbrowse : chr2R:3802837-3803968 (-) // 100.0 //
Probeset : 1627505_at
Accessions : protein= NP_610330; /// NP_995776;, nucleotide= NM_136486; /// NM_206054;
FlyMine data for FBgn0033232.
BioGrid reports that CG12159 interacts with CG31792 .
VDRC has 3 RNAi stocks for FBgn0033232 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain123 24 of 4 1.20None
Head114 84 of 4 1.20None
Eye159 64 of 4 1.61Up
Thoracicoabdominal ganglion104 104 of 4 1.10None
Salivary gland98 64 of 4 1.00None
Crop90 34 of 4 0.90None
Midgut60 34 of 4 0.60Down
Tubule61 44 of 4 0.60Down
Hindgut76 34 of 4 0.80Down
Heart203 94 of 4 2.05Up
Fat body149 134 of 4 1.51Up
Ovary135 54 of 4 1.40Up
Testis202 44 of 4 2.00Up
Male accessory glands175 94 of 4 1.80Up
Virgin spermatheca90 24 of 4 0.91None
Mated spermatheca73 44 of 4 0.74Down
Adult carcass114 84 of 4 1.20None
Larval CNS105 144 of 4 1.06None
Larval Salivary gland72 44 of 4 0.73Down
Larval midgut41 34 of 4 0.41Down
Larval tubule124 34 of 4 1.30Up
Larval hindgut64 44 of 4 0.65Down
Larval fat body118 124 of 4 1.20None
Larval trachea115 64 of 4 1.17None
Larval carcass67 54 of 4 0.68Down
S2 cells (growing)296 24 of 4 2.99Up
Whole fly99 64 of 4

Looking for FBgn0033232. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime