FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033235 through 18771 annotations produced 1 hits

(CG8728):

Annotation Number : CG8728
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033235
Gbrowse : chr2R:3824361-3826674 (-) // 100.0 //
Probeset : 1628751_at
Accessions : protein= NP_610333;, nucleotide= NM_136489;
Pathway : 0005759 // mitochondrial matrix // inferred from sequence or structural similarity
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inf
FlyMine data for FBgn0033235.
BDGP gene expression has embryonic in situ data for CG8728: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0033235 available for purchase.
VDRC has 4 RNAi stocks for FBgn0033235 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	257 ± 3	4 of 4	0.80	Down
Head	201 ± 6	4 of 4	0.70	Down
Eye	163 ± 4	4 of 4	0.53	Down
Thoracicoabdominal ganglion	282 ± 3	4 of 4	0.90	Down
Salivary gland	197 ± 8	4 of 4	0.64	Down
Crop	244 ± 6	4 of 4	0.80	Down
Midgut	204 ± 4	4 of 4	0.70	Down
Tubule	328 ± 35	4 of 4	1.10	None
Hindgut	207 ± 12	4 of 4	0.70	Down
Heart	210 ± 3	4 of 4	0.68	Down
Fat body	251 ± 16	4 of 4	0.82	Down
Ovary	406 ± 8	4 of 4	1.30	Up
Testis	1107 ± 37	4 of 4	3.60	Up
Male accessory glands	210 ± 9	4 of 4	0.70	Down
Virgin spermatheca	249 ± 7	4 of 4	0.81	Down
Mated spermatheca	253 ± 16	4 of 4	0.82	Down
Adult carcass	225 ± 10	4 of 4	0.70	Down
Larval CNS	291 ± 29	4 of 4	0.95	None
Larval Salivary gland	314 ± 13	4 of 4	1.02	None
Larval midgut	207 ± 16	4 of 4	0.68	Down
Larval tubule	203 ± 14	4 of 4	0.70	Down
Larval hindgut	297 ± 10	4 of 4	0.97	None
Larval fat body	255 ± 22	4 of 4	0.80	None
Larval trachea	191 ± 23	4 of 4	0.62	Down
Larval carcass	262 ± 24	4 of 4	0.85	None
S2 cells (growing)	379 ± 12	4 of 4	1.23	Up
Whole fly	307 ± 3	4 of 4

Looking for FBgn0033235. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720