Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0033249 through 18771 annotations produced 1 hits


(CG11191):

Annotation Number : CG11191
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033249
Gbrowse : chr2R:3888153-3889625 (-) // 100.0 //
Probeset : 1637648_at
Accessions : protein= NP_610345;, nucleotide= NM_136501;
FlyMine data for FBgn0033249.
BDGP gene expression has embryonic in situ data for CG11191: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0033249 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain357 ± 64 of 415.90Up
Head128 ± 94 of 4 5.70Up
Eye163 ± 104 of 4 7.26Up
Thoracicoabdominal ganglion696 ± 234 of 431.00Up
Salivary gland1 ± 00 of 4 0.06Down
Crop1 ± 00 of 4 0.10Down
Midgut1 ± 00 of 4 0.10Down
Tubule1 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.10Down
Heart3 ± 10 of 4 0.14Down
Fat body8 ± 40 of 4 0.36Down
Ovary1 ± 10 of 4 0.10Down
Testis4 ± 10 of 4 0.20Down
Male accessory glands1 ± 00 of 4 0.10Down
Virgin spermatheca5 ± 20 of 4 0.25Down
Mated spermatheca6 ± 20 of 4 0.30Down
Adult carcass27 ± 31 of 4 1.20None
Larval CNS101 ± 14 of 4 4.51Up
Larval Salivary gland5 ± 20 of 4 0.26Down
Larval midgut3 ± 10 of 4 0.17Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.07Down
Larval fat body7 ± 10 of 4 0.30Down
Larval trachea3 ± 30 of 4 0.16Down
Larval carcass6 ± 10 of 4 0.30Down
S2 cells (growing)2 ± 10 of 4 0.11Down
Whole fly22 ± 10 of 4

Looking for FBgn0033249. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime