Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033273 through 18771 annotations produced 1 hits



(CG2183):

Annotation Number : CG2183
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033273
Gbrowse : chr2R:4055451-4057596 (+) // 100.0 //
Probeset : 1641671_at
Accessions : protein= NP_610362;, nucleotide= NM_136518;
FlyMine data for FBgn0033273.
BDGP gene expression has embryonic in situ data for CG2183: 4 pix of staining in 1 body parts.
Homophila reports that CG2183 is a close match (1e-11) to human gene ANK1;SPH2 (NP_065210), a gene associated with Spherocytosis-2 (3).
VDRC has 2 RNAi stocks for FBgn0033273 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain458 ± 84 of 4 1.60Up
Head203 ± 64 of 4 0.70Down
Eye113 ± 104 of 4 0.39Down
Thoracicoabdominal ganglion487 ± 54 of 4 1.70Up
Salivary gland33 ± 13 of 4 0.12Down
Crop52 ± 44 of 4 0.20Down
Midgut12 ± 11 of 4 0.00Down
Tubule33 ± 14 of 4 0.10Down
Hindgut55 ± 34 of 4 0.20Down
Heart63 ± 34 of 4 0.22Down
Fat body93 ± 54 of 4 0.33Down
Ovary619 ± 184 of 4 2.20Up
Testis86 ± 24 of 4 0.30Down
Male accessory glands39 ± 24 of 4 0.10Down
Virgin spermatheca43 ± 24 of 4 0.15Down
Mated spermatheca54 ± 24 of 4 0.19Down
Adult carcass66 ± 64 of 4 0.20Down
Larval CNS189 ± 114 of 4 0.66Down
Larval Salivary gland25 ± 53 of 4 0.09Down
Larval midgut9 ± 11 of 4 0.03Down
Larval tubule67 ± 34 of 4 0.20Down
Larval hindgut52 ± 44 of 4 0.18Down
Larval fat body49 ± 54 of 4 0.20Down
Larval trachea70 ± 54 of 4 0.25Down
Larval carcass30 ± 14 of 4 0.11Down
S2 cells (growing)125 ± 34 of 4 0.44Down
Whole fly287 ± 134 of 4

Looking for FBgn0033273. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime