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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033274 through 18771 annotations produced 1 hits



(CG14757):

Annotation Number : CG14757
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033274
Gbrowse : chr2R:4059968-4061118 (-) // 100.0 //
Probeset : 1636564_at
Accessions : protein= NP_610363;, nucleotide= NM_136519;
Pathway : succinate to ubiquinone // inferred from sequence or structural similarity /// 0018293 // protein-FAD linkage // inferr
Interpro : 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence o
FlyMine data for FBgn0033274.
TRiP has 1 RNAi stocks for FBgn0033274 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033274 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain509 54 of 4 1.40Up
Head332 74 of 4 0.90None
Eye168 94 of 4 0.45Down
Thoracicoabdominal ganglion753 214 of 4 2.00Up
Salivary gland48 64 of 4 0.13Down
Crop102 14 of 4 0.30Down
Midgut55 64 of 4 0.10Down
Tubule120 204 of 4 0.30Down
Hindgut404 64 of 4 1.10None
Heart145 94 of 4 0.39Down
Fat body25 34 of 4 0.07Down
Ovary21 14 of 4 0.10Down
Testis590 94 of 4 1.60Up
Male accessory glands3 10 of 4 0.00Down
Virgin spermatheca23 24 of 4 0.06Down
Mated spermatheca21 24 of 4 0.06Down
Adult carcass1036 194 of 4 2.80Up
Larval CNS17 24 of 4 0.05Down
Larval Salivary gland6 20 of 4 0.02Down
Larval midgut18 71 of 4 0.05Down
Larval tubule10 21 of 4 0.00Down
Larval hindgut55 54 of 4 0.15Down
Larval fat body91 503 of 4 0.20Down
Larval trachea4 40 of 4 0.01Down
Larval carcass5 10 of 4 0.01Down
S2 cells (growing)18 14 of 4 0.05Down
Whole fly371 294 of 4

Looking for FBgn0033274. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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