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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0033275 through 18771 annotations produced 1 hits


Annotation Number : CG14756
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033275
Gbrowse : chr2R:4092396-4093211 (-) // 99.51 //
Probeset : 1641133_at
Accessions : protein= NP_610364;, nucleotide= NM_136520;
FlyMine data for FBgn0033275.
BDGP gene expression has embryonic in situ data for CG14756: 11 pix of staining in 3 body parts.
BioGrid reports that CG14756 interacts with CG7162 .
VDRC has 3 RNAi stocks for FBgn0033275 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.00None
Head1 00 of 4 0.00None
Eye2 10 of 4 0.10None
Thoracicoabdominal ganglion2 10 of 4 0.10None
Salivary gland6 20 of 4 0.22None
Crop4 20 of 4 0.20None
Midgut4 00 of 4 0.20None
Tubule10 11 of 4 0.40Down
Hindgut5 31 of 4 0.20None
Heart1 00 of 4 0.05None
Fat body3 30 of 4 0.14None
Ovary1 00 of 4 0.00None
Testis0 00 of 4 0.00Down
Male accessory glands1 00 of 4 0.00None
Virgin spermatheca3 10 of 4 0.13None
Mated spermatheca1 00 of 4 0.05None
Adult carcass5 20 of 4 0.20None
Larval CNS2 20 of 4 0.08None
Larval Salivary gland3 10 of 4 0.13None
Larval midgut5 10 of 4 0.19None
Larval tubule7 10 of 4 0.30None
Larval hindgut2 10 of 4 0.08None
Larval fat body4 10 of 4 0.20None
Larval trachea1 10 of 4 0.05None
Larval carcass2 00 of 4 0.10None
S2 cells (growing)3 10 of 4 0.11None
Whole fly27 83 of 4

Looking for FBgn0033275. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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