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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033285 through 18771 annotations produced 1 hits



(CG18449):

Annotation Number : CG18449
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033285
Gbrowse : chr2R:4254663-4255432 (-) // 100.0 //
Probeset : 1623004_a_at
Accessions : protein= NP_610374;, nucleotide= NM_136530;
FlyMine data for FBgn0033285.
BioGrid reports that CG18449 interacts with CG3661 CG6459 .
VDRC has 1 RNAi stocks for FBgn0033285 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.00Down
Head7 ± 00 of 4 0.00Down
Eye3 ± 10 of 4 0.01Down
Thoracicoabdominal ganglion8 ± 20 of 4 0.00Down
Salivary gland15 ± 50 of 4 0.03Down
Crop8 ± 10 of 4 0.00Down
Midgut3 ± 10 of 4 0.00Down
Tubule7 ± 00 of 4 0.00Down
Hindgut6 ± 20 of 4 0.00Down
Heart2 ± 00 of 4 0.01Down
Fat body11 ± 43 of 4 0.02Down
Ovary2 ± 00 of 4 0.00Down
Testis2805 ± 1724 of 4 6.00Up
Male accessory glands9 ± 31 of 4 0.00Down
Virgin spermatheca11 ± 10 of 4 0.02Down
Mated spermatheca24 ± 32 of 4 0.05Down
Adult carcass23 ± 22 of 4 0.00Down
Larval CNS4 ± 20 of 4 0.01Down
Larval Salivary gland8 ± 00 of 4 0.02Down
Larval midgut8 ± 20 of 4 0.02Down
Larval tubule6 ± 20 of 4 0.00Down
Larval hindgut9 ± 22 of 4 0.02Down
Larval fat body378 ± 1844 of 4 0.80None
Larval trachea21 ± 283 of 4 0.05Down
Larval carcass8 ± 20 of 4 0.02Down
S2 cells (growing)6 ± 10 of 4 0.01Down
Whole fly465 ± 484 of 4

Looking for FBgn0033285. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime