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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033307 through 18771 annotations produced 1 hits



(CG14752):

Annotation Number : CG14752
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033307
Gbrowse : chr2R:4478074-4479325 (+) // 100.0 //
Probeset : 1631366_at
Accessions : protein= NP_610393;, nucleotide= NM_136549;
FlyMine data for FBgn0033307.
BioGrid reports that CG14752 interacts with CG3052 .
VDRC has 2 RNAi stocks for FBgn0033307 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain21 ± 22 of 4 0.60Down
Head32 ± 53 of 4 1.00None
Eye26 ± 31 of 4 0.78None
Thoracicoabdominal ganglion23 ± 22 of 4 0.70Down
Salivary gland28 ± 50 of 4 0.85None
Crop32 ± 23 of 4 0.90None
Midgut36 ± 52 of 4 1.10None
Tubule17 ± 00 of 4 0.50Down
Hindgut41 ± 34 of 4 1.20None
Heart21 ± 22 of 4 0.64Down
Fat body38 ± 83 of 4 1.14None
Ovary15 ± 12 of 4 0.50Down
Testis13 ± 10 of 4 0.40Down
Male accessory glands127 ± 34 of 4 3.70Up
Virgin spermatheca44 ± 03 of 4 1.30Up
Mated spermatheca48 ± 43 of 4 1.43Up
Adult carcass39 ± 43 of 4 1.20None
Larval CNS18 ± 42 of 4 0.53Down
Larval Salivary gland35 ± 50 of 4 1.05None
Larval midgut60 ± 54 of 4 1.79Up
Larval tubule26 ± 52 of 4 0.80None
Larval hindgut43 ± 44 of 4 1.29None
Larval fat body31 ± 82 of 4 0.90None
Larval trachea51 ± 104 of 4 1.51Up
Larval carcass70 ± 42 of 4 2.08Up
S2 cells (growing)31 ± 33 of 4 0.92None
Whole fly33 ± 34 of 4

Looking for FBgn0033307. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime