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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033324 through 18771 annotations produced 1 hits



(CG14744):

Annotation Number : CG14744
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033324
Gbrowse : chr2R:4594582-4596632 (-) // 100.0 //
Probeset : 1633953_at
Accessions : protein= NP_001097232;, nucleotide= NM_001103762;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0033324.
BioGrid reports that CG14744 interacts with CG13806 CG32139 CG5568 CG5731 CG31679 CG31811 CG1034 CG8823 CG4673 CG15112 CG17309 CG13900 CG9027 .
VDRC has 3 RNAi stocks for FBgn0033324 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 0.20Down
Head1 00 of 4 0.20Down
Eye2 00 of 4 0.20Down
Thoracicoabdominal ganglion5 10 of 4 0.50None
Salivary gland7 20 of 4 0.78None
Crop5 11 of 4 0.50None
Midgut16 13 of 4 1.60None
Tubule4 00 of 4 0.50Down
Hindgut3 10 of 4 0.40None
Heart2 00 of 4 0.23Down
Fat body1 00 of 4 0.14Down
Ovary1 00 of 4 0.10Down
Testis62 44 of 4 6.30Up
Male accessory glands6 10 of 4 0.70None
Virgin spermatheca2 00 of 4 0.24Down
Mated spermatheca3 10 of 4 0.33None
Adult carcass6 20 of 4 0.70None
Larval CNS3 10 of 4 0.32None
Larval Salivary gland3 10 of 4 0.38None
Larval midgut15 22 of 4 1.56None
Larval tubule2 00 of 4 0.30None
Larval hindgut3 10 of 4 0.36None
Larval fat body10 41 of 4 1.10None
Larval trachea1 10 of 4 0.14Down
Larval carcass2 00 of 4 0.28None
S2 cells (growing)3 10 of 4 0.34None
Whole fly10 23 of 4

Looking for FBgn0033324. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime