FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033355 through 18771 annotations produced 1 hits

(CG13748):

Annotation Number : CG13748
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033355
Gbrowse : chr2R:4827973-4828315 (+) // 100.0 //
Probeset : 1628302_at
Accessions : protein= NP_610430;, nucleotide= NM_136586;
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from sequence or structural similarity /// 0004867 /
FlyMine data for FBgn0033355.
Homophila reports that CG13748 is a close match (8e-11) to human gene COL6A3 (NP_476508), a gene associated with Bethlem myopathy, 158810 (3);Ullrich congenital muscular dystrophy, 254090 (3).
TRiP has 1 RNAi stocks for FBgn0033355 available for purchase.
VDRC has 3 RNAi stocks for FBgn0033355 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.40	None
Head	1 ± 0	0 of 4	0.30	None
Eye	2 ± 0	0 of 4	0.52	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.20	None
Salivary gland	1 ± 0	0 of 4	0.32	None
Crop	6 ± 2	0 of 4	1.70	None
Midgut	6 ± 1	0 of 4	1.50	None
Tubule	44 ± 19	2 of 4	10.90	Up
Hindgut	2 ± 1	0 of 4	0.60	None
Heart	4 ± 1	0 of 4	1.08	None
Fat body	0 ± 0	0 of 4	0.22	None
Ovary	2 ± 1	0 of 4	0.60	None
Testis	7 ± 0	0 of 4	1.90	None
Male accessory glands	28 ± 5	2 of 4	6.90	Up
Virgin spermatheca	2 ± 1	0 of 4	0.58	None
Mated spermatheca	4 ± 1	0 of 4	0.99	None
Adult carcass	1 ± 0	0 of 4	0.40	None
Larval CNS	0 ± 0	0 of 4	0.16	None
Larval Salivary gland	7 ± 0	0 of 4	1.89	None
Larval midgut	25 ± 4	4 of 4	6.28	Up
Larval tubule	259 ± 37	4 of 4	63.60	Up
Larval hindgut	346 ± 48	4 of 4	85.12	Up
Larval fat body	15 ± 7	1 of 4	3.80	None
Larval trachea	18 ± 6	4 of 4	4.46	Up
Larval carcass	15 ± 2	2 of 4	3.78	Up
S2 cells (growing)	1 ± 0	0 of 4	0.44	None
Whole fly	4 ± 1	0 of 4

Looking for FBgn0033355. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720