FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0033357 through 18771 annotations produced 1 hits

Translocase of outer membrane 7 (Tom7):

Annotation Number : CG8226
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033357
Gbrowse : chr2R:4839192-4839694 (+) // 100.0 //
Probeset : 1629730_at
Accessions : protein= NP_610433;, nucleotide= NM_136589;
Pathway : 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membra
Interpro : 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from sequence or structural
FlyMine data for FBgn0033357.
VDRC has 2 RNAi stocks for FBgn0033357 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	843 ± 10	4 of 4	1.10	None
Head	1101 ± 23	4 of 4	1.40	Up
Eye	993 ± 26	4 of 4	1.25	Up
Thoracicoabdominal ganglion	1275 ± 44	4 of 4	1.60	Up
Salivary gland	2005 ± 72	4 of 4	2.52	Up
Crop	1524 ± 61	4 of 4	1.90	Up
Midgut	912 ± 19	4 of 4	1.10	Up
Tubule	1572 ± 64	4 of 4	2.00	Up
Hindgut	1246 ± 24	4 of 4	1.60	Up
Heart	1193 ± 11	4 of 4	1.50	Up
Fat body	1528 ± 109	4 of 4	1.92	Up
Ovary	789 ± 9	4 of 4	1.00	None
Testis	999 ± 9	4 of 4	1.30	Up
Male accessory glands	1558 ± 53	4 of 4	2.00	Up
Virgin spermatheca	1753 ± 46	4 of 4	2.20	Up
Mated spermatheca	1791 ± 102	4 of 4	2.25	Up
Adult carcass	1066 ± 42	4 of 4	1.30	Up
Larval CNS	1105 ± 38	4 of 4	1.39	Up
Larval Salivary gland	2358 ± 45	4 of 4	2.96	Up
Larval midgut	855 ± 29	4 of 4	1.07	None
Larval tubule	1179 ± 31	4 of 4	1.50	Up
Larval hindgut	1433 ± 21	4 of 4	1.80	Up
Larval fat body	837 ± 36	4 of 4	1.10	None
Larval trachea	959 ± 130	4 of 4	1.20	None
Larval carcass	1118 ± 98	4 of 4	1.40	Up
S2 cells (growing)	843 ± 15	4 of 4	1.06	None
Whole fly	797 ± 35	4 of 4

Looking for FBgn0033357. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720