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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033367 through 18771 annotations produced 1 hits



(CG8193):

Annotation Number : CG8193
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033367
Gbrowse : chr2R:4929764-4932213 (-) // 100.0 //
Probeset : 1633048_at
Accessions : protein= NP_610443;, nucleotide= NM_136599;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from elect
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004503 // monophenol monooxygenase activit
FlyMine data for FBgn0033367.
BDGP gene expression has embryonic in situ data for CG8193: 18 pix of staining in 3 body parts.
VDRC has 3 RNAi stocks for FBgn0033367 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain288 ± 194 of 4 2.50Up
Head586 ± 294 of 4 5.10Up
Eye88 ± 204 of 4 0.76None
Thoracicoabdominal ganglion225 ± 174 of 4 2.00Up
Salivary gland34 ± 33 of 4 0.30Down
Crop39 ± 34 of 4 0.30Down
Midgut24 ± 10 of 4 0.20Down
Tubule18 ± 41 of 4 0.20Down
Hindgut15 ± 30 of 4 0.10Down
Heart2006 ± 774 of 417.39Up
Fat body110 ± 204 of 4 0.96None
Ovary14 ± 10 of 4 0.10Down
Testis94 ± 84 of 4 0.80None
Male accessory glands20 ± 51 of 4 0.20Down
Virgin spermatheca55 ± 54 of 4 0.48Down
Mated spermatheca41 ± 84 of 4 0.36Down
Adult carcass729 ± 564 of 4 6.30Up
Larval CNS35 ± 134 of 4 0.31Down
Larval Salivary gland24 ± 63 of 4 0.21Down
Larval midgut38 ± 20 of 4 0.33Down
Larval tubule48 ± 123 of 4 0.40Down
Larval hindgut144 ± 164 of 4 1.25None
Larval fat body169 ± 604 of 4 1.50None
Larval trachea424 ± 844 of 4 3.68Up
Larval carcass986 ± 1674 of 4 8.55Up
S2 cells (growing)357 ± 44 of 4 3.10Up
Whole fly115 ± 134 of 4

Looking for FBgn0033367. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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