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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033369 through 18771 annotations produced 1 hits



(CG8197):

Annotation Number : CG8197
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033369
Gbrowse : chr2R:4948127-4949429 (-) // 100.0 //
Probeset : 1636227_at
Accessions : protein= NP_610445;, nucleotide= NM_136601;
Interpro : 0005515 // protein binding // inferred from electronic annotation
FlyMine data for FBgn0033369.
VDRC has 2 RNAi stocks for FBgn0033369 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.00Down
Head1 00 of 4 0.00Down
Eye4 20 of 4 0.12Down
Thoracicoabdominal ganglion4 20 of 4 0.10Down
Salivary gland4 20 of 4 0.12Down
Crop4 10 of 4 0.10Down
Midgut9 30 of 4 0.20Down
Tubule4 00 of 4 0.10Down
Hindgut2 10 of 4 0.10Down
Heart0 00 of 4 0.02Down
Fat body1 00 of 4 0.03Down
Ovary2 00 of 4 0.10Down
Testis421 64 of 410.70Up
Male accessory glands3 10 of 4 0.10Down
Virgin spermatheca3 10 of 4 0.09Down
Mated spermatheca0 00 of 4 0.02Down
Adult carcass2 10 of 4 0.10Down
Larval CNS0 00 of 4 0.02Down
Larval Salivary gland9 21 of 4 0.24Down
Larval midgut7 11 of 4 0.18Down
Larval tubule3 10 of 4 0.10Down
Larval hindgut3 00 of 4 0.09Down
Larval fat body44 203 of 4 1.10None
Larval trachea3 30 of 4 0.08Down
Larval carcass6 10 of 4 0.17Down
S2 cells (growing)0 00 of 4 0.02Down
Whole fly39 44 of 4

Looking for FBgn0033369. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime