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FlyAtlas: the Drosophila gene expression atlas

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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0033429 through 18771 annotations produced 1 hits



(CG12929):

Annotation Number : CG12929
Flybase ID : FBgn0033429
Gbrowse : chr2R:5473629-5474170 (-) // 100.0 //
Probeset : 1638544_at
Accessions : protein= NP_001097245; /// NP_610502;, nucleotide= NM_001103775; /// NM_136658;
FlyMine data for FBgn0033429.
VDRC has 2 RNAi stocks for FBgn0033429 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain91 34 of 4 1.10None
Head83 44 of 4 1.00None
Eye116 54 of 4 1.37Up
Thoracicoabdominal ganglion124 64 of 4 1.50Up
Salivary gland228 154 of 4 2.68Up
Crop73 24 of 4 0.90None
Midgut96 34 of 4 1.10None
Tubule117 24 of 4 1.40Up
Hindgut121 24 of 4 1.40Up
Heart97 24 of 4 1.14None
Fat body88 124 of 4 1.04None
Ovary84 14 of 4 1.00None
Testis146 74 of 4 1.70Up
Male accessory glands135 54 of 4 1.60Up
Virgin spermatheca79 34 of 4 0.94None
Mated spermatheca83 54 of 4 0.99None
Adult carcass77 24 of 4 0.90None
Larval CNS124 114 of 4 1.46Up
Larval Salivary gland151 24 of 4 1.79Up
Larval midgut89 44 of 4 1.05None
Larval tubule128 24 of 4 1.50Up
Larval hindgut104 44 of 4 1.23Up
Larval fat body68 54 of 4 0.80None
Larval trachea137 94 of 4 1.62Up
Larval carcass59 34 of 4 0.70Down
S2 cells (growing)111 34 of 4 1.31Up
Whole fly85 44 of 4

Looking for FBgn0033429. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime